|
The field names below are not necessarily shown in the order that they appear in downloaded data files.
Note that the data contained in Calflora is dynamic,
and the database tables may also change structure occasionally
to adapt to new needs or processes.
This document last UPDATED 02/26/2024 13:34:12
.
CALFLORA RECORD NUMBER
[calrecnum]
Example: 7245
Max size: 5
This is the unique ID integer for a Calflora record
of a particular taxon.
Once a calrecnum is assigned to a taxon, it will
never be re-assigned to a different taxon.
If the scientific name of a plant changes, however,
the record for the old name may be classified inactive.
CALFLORA TAXON NAME
[calname]
Example: Abronia villosa S. Watson var. aurita (Abrams) Jepson
Max size: 255
(logistically longest: 138 for Pentagramma triangularis ssp. semipallida)
Full name of taxon, concatenated from the separate name component fields:
"genus species author1 rank ssp_var author2"
Usage and spelling generally follows the Jepson eFlora.
Differs from field taxon in that it includes author citation.
TAXON
[taxon]
Example: Abronia maritima
Max size: 128
Name of taxon, without authors. Useful for matching data
between data sets.
concatenated from the separate name component fields:
= "genus species rank ssp_var"
Note: A taxon record does not always correspond to unique
plant species or end-points of diversity.
i.e. Calflora contains
separate records for Pentagramma triangularis, Pentagramma
triangularis ssp.triangularis, and Pentagramma triangularis
ssp. semipallida. If one were tracking biodiversity for an area, it
would be a mistake to count both a parent taxon record (Pentagramma
triangularis) and a child taxon record (Pentagramma triangularis
ssp. semipallida) as two separate units of biodiversity. See
additional discussion under the field description for parent_child.
GENUS
[genus]
Example: Abronia
Max size: 17
Genus name of taxon.
SPECIES
[species]
Example: villosa
Max size: 21
Specific epithet of taxon. Note the uses of the word 'species' to refer to specific epithet is incorrect. Species refers to unique combinations of genus plus specific epithet.
AUTHOR 1
[author1]
Example: S. Watson
Max size: 46
Species author of taxon, including parenthetical authorship.
RANK
[rank]
Example: var.
Max size: 4
Infraspecific rank of taxon - "var." or "ssp."
SSP_VAR
[ssp_var]
Example: aurita
Max size: 19
Infraspecific epithet for taxon.
AUTHOR 2
[author2]
Example: (Abrams) Jepson
Max size: 49
Infraspecific author of taxon, including parenthetical authorship.
FAMILY
[family]
Example: ASTERACEAE
Max size: 16
Family assignments follow the Jepson eFlora.
CATEGORY
[category]
Example: angiosperm
Please see Categories for a full explanation.
This field is designed to facilitate sorting of records in a phylogenetic order.
PARENT/CHILD TAG
[parent_child]
Example: child
Max size: 10
This field tags the record as
child or parent.
A child is a fully recognized taxon
that is included in another taxon within
this database.
A parent is the taxon within which the child is included.
For example,
|
Poa secunda ssp. juncifolia | is a child, and |
Poa secunda | is the parent of that child. |
In a case like this, the information available in this database
for the child
will be more articulated than information available for the parent.
On the other hand, information for the parent will in some ways be
an aggregate of information for all of the children
(subspecies and varieties).
For instance, observation data reported for Poa secunda
will include all observation data for
Poa secunda ssp. juncifolia
and Poa secunda ssp. secunda.
This tag is intended to facilitate species
counts--including both a child and its parent results in an over-count of
taxa.
PARENT RECORDNUM
[parent_rec]
Example: 345
Max size: 4
For children this is the calrecnum of the parent.
PARENT NAME
[parent_name]
Example: Trifolium andersonii
Max size: 42
For children, this is the name (genus + species + rank + ssp_var) of the parent.
TREATMENT NOTE
[treatment]
Any special note about the taxonomic treatment of the plant.
NATIVE
[native]
Example: t
Max Size: 1 Each taxon is classed as t (true) for Native, or f (false)
for Non-Native (Introduced).
LIFEFORM
[lifeform]
Example: Perennial
Max size: 22
Each taxon is classed as one or more of the following:
- Fern
- Annual herb
- Perennial herb
- Biennial herb
- Tree
- Shrub
- Vine
followed by adjectives in parentheses--e.g. Shrub (stem succulent)
- aquatic
- biennial
- bulb
- carnivorous
- hemiparasitic
- mosslike
- rhizomatous
- parasitic
- mycoparasitic (previously "saprophitic")
- stem succulent
Transcribed from
Lum/Walker
codes except that occurrences of 'not
specified' were replaced with an interpretation of description in Munz
or the Jepson Manual. For taxa included in the CNPS Inventory (1994),
this field contains the lifeform descriptor used in that database
(some infrequently-used adjectives have been dropped). For taxa not
included in either Lum/Walker or the CNPS Inventory, this field
contains transcriptions of data from the USDA PLANTS database. All
Pteridophytes are classified as lifeform 'Fern'.
All Ericaceae (Monotropoideae) previously marked 'saprophytic'
reclassified as 'mycoparasitic' per communication with Garry Wallace
(Wallace 1975).
US DISTRIBUTION
[us_dist]
Example: CA Endemic
Max size: 20
Describes distribution beyond California.
CA Endemic | |
CA+ | extends only slightly beyond CA borders |
wNAm | beyond CA but confined to w. North America |
NAm/WW | native here but range extends beyond N.Am. |
Introd. | introduced
|
For non-endemic taxa included in CNPS Inventory, this field contains the non-California portion of the distribution entry from that database: standard 2-letter codes for U.S. states, also
BA | Baja California |
GU | Isla Guadalupe, BA |
SA | South America |
SO | Sonora, Mexico |
COUNTY LIST (County Distributions)
[countylist]
Example: ALP ELD HUM
List of County regions where this species is, was, or may be present, based
on data included in the Calflora Occurrence Database.
ALA | Alameda
|
ALP | Alpine
|
AMA | Amador
|
BUT | Butte
|
CAL | Calaveras
|
CCA | Contra Costa
|
COL | Colusa
|
DNT | Del Norte
|
ELD | El Dorado
|
FRE | Fresno
|
GLE | Glenn
|
HUM | Humboldt
|
IMP | Imperial
|
INY | Inyo
|
KNG | Kings
|
KRN | Kern
|
LAK | Lake
|
LAS | Lassen
|
LAX | Los Angeles
|
MAD | Madera
|
MEN | Mendocino
|
MER | Merced
|
MNO | Mono
|
MNT | Monterey
|
MOD | Modoc
|
MPA | Mariposa
|
MRN | Marin
|
NAP | Napa
|
NEV | Nevada
|
ORA | Orange
|
PLA | Placer
|
PLU | Plumas
|
RIV | Riverside
|
SAC | Sacramento
|
SBA | Santa Barbara
|
SBD | San Bernardino
|
SBT | San Benito
|
SCL | Santa Clara
|
SCR | Santa Cruz
|
SDG | San Diego
|
SFO | San Francisco
|
SMT | San Mateo
|
SHA | Shasta
|
SIE | Sierra
|
SIS | Siskiyou
|
SJQ | San Joaquin
|
SLO | San Luis Obispo
|
SOL | Solano
|
SON | Sonoma
|
STA | Stanislaus
|
SUT | Sutter
|
TEH | Tehama
|
TRI | Trinity
|
TUL | Tulare
|
TUO | Tuolumne
|
VEN | Ventura
|
YOL | Yolo |
YUB | Yuba |
PLANT COMMUNITIES
[plant_community]
Example: m16m17m15
Max size: 42
A plant community system introduced in
Philip A. Munz 1968,
Supplement to a California flora. Univ. of California Press, Berkeley, CA. 224 pp.
The system is utilized in
Griffin and Critchfield 1972,
The Distribution of Forest Trees in California,
U.S. Department of Agriculture, Berkeley, CA. 64 pp.
List of two-digit codes each preceded by a 'm', no spaces (e.g. 'm13m27m29') Codes m01-m29 correspond to numbers used in Munz68 plant communities list (see Munz68 pp12-18 for descriptions)
|
| m01 | Coastal Strand
| m02 | Coastal Salt Marsh
| m03 | Freshwater Marsh (note: expanded to include all freshwater wetlands)
| m04 | Northern Coastal Scrub
| m05 | Coastal Sage Scrub
| m06 | Sagebrush Scrub
| m07 | Shadscale Scrub
| m08 | Creosote Bush Scrub
| m09 | Alkali Sink
| m10 | North Coastal Coniferous Forest
| m11 | Closed-cone Pine Forest
| m12 | Redwood Forest
| m13 | Douglas-Fir Forest
| m14 | Yellow Pine Forest
| m15 | Red Fir Forest
| m16 | Lodgepole Forest
| m17 | Subalpine Forest
| m18 | Bristle-cone Pine Forest
| m19 | Mixed Evergreen Forest
| m20 | Northern Oak Woodland
| m21 | Southern Oak Woodland
| m22 | Foothill Woodland
| m23 | Chaparral
| m24 | Coastal Prairie
| m25 | Valley Grassland
| m26 | Alpine Fell-fields
| m27 | Northern Juniper Woodland
| m28 | Pinyon-Juniper Woodland
| m29 | Joshua Tree Woodland
|
Other codes from
Lum/Walker:
m30 | weed, species characteristic of disturbed places,
| m31 | agricultural weed,
| m40 | escaped cultivar,
| m41 | introduced plant which is becoming naturalized,
| m42 | agricultural plant,
| m50 | many plant communities,
| m80 | community not given, species associated with a peculiar habitat.
|
Additional Codes
CNPS RARITY CODE
[rarity]
Example: 2B
Values of 'Rarity' code from CNPS Inventory database (CNPS 2019).
CALIFORNIA STATE LISTING STATUS
[ca_status]
Max size: 64 char.
State listing codes from
California Department of Fish and Wildlife. Updated January, 2021.
SE | State-listed endangered |
ST | State-listed threatened |
SR | State-listed rare |
SC | State candidate for listing |
FEDERAL LISTING STATUS
[fed_status]
Max size: 64 char.
Federal listing codes from
California Department of Fish and Wildlife. Updated January, 2021.
FE | Federally listed endangered |
FT | Federally listed threatened |
FPE | Federally proposed endangered |
FPT | Federally proposed,threatened |
FDR | Federally delisted - recovered |
HABITATS
[habitat_descriptors]
Example: riparian
Max size: 57
Captures habitat descriptors from
Lum/Walker
and CNPS Inventory (1994) databases, includes the following keywords:
alluvial-fans
bogs/fens
brackish-marsh
canyons
cliffs
coastal
disturbed
dunes
edges
freshwater-marsh
lake-margin
lakes
marsh
meadows
openings
ridges
riparian
salt-marsh
seeps
slopes
streambanks
washes
Data is not available for all taxa.
CDFA WEED STATUS
[cdfa_weed_status]
Example: A
Max size: 16
Weed status rating
codes from the California
Department of Food and Agriculture, Plant Health and Pest
Prevention Services.
Last updated in Calflora: October 2000 with classifications as of September 2000 (CDFA Weeds 2000).
Possible values:
A
|
"An organism of know economic importance subject to state
(or commissioner when acting as a state agent) enforced action
involving: eradication, quarantine, containment, rejection, or other
holding action."
|
B
|
"An organism of known economic importance subject to: eradication,
containment, control or other holding action at the discretion of the
individual county agricultural commissioner." OR "An organism of know
economic importance subject to state endorsed holding action and
eradication only when found in a nursery."
|
C
|
"An organism subject to no state enforced action outside of nurseries
except to retard spread. At the discretion of the commissioner." OR
"An organism subject to no state enforced action except to provide for
pest cleanliness in nurseries."
|
D
|
"No action. (Parasites, predators, and organisms of little or no economic importance)."
|
Q
|
"An organism or disorder requiring temporary "A" action pending
determination of a permanent rating. The organism is suspected to be
of economic importance but its status is uncertain because of
incomplete identification or inadequate information. In the case of
an established infestation, at the discretion of the Assistant
Director for Plant Industry, the Department will conduct surveys and
will convene the Division Pest Study Team to determine a permanent
rating."
|
FEDERAL NOXIOUS WEED STATUS
[fed_nox_weed]
Max size: 34
Weed status rating codes from the United States Department of Agriculture Animal and Plant Health Inspection Service.
Last updated in Calflora: October 26, 2000 with ratings as of September 8, 2000 (USDA 2000)
Values:
PLANTS CODE
[plants_code]
Example: ABCO
Max size: 7
Code from USDA PLANTS for this name.
WETLAND INDICATOR
[wetland]
Example: OBL (obligate)
Max size: 4
The likelihood of a species occurring in wetlands versus non wetlands in
California as determined by the
Army Corps of Engineers in the
National Wetland Plant List (updated 2016).
The dataset was developed by
Robert W. Lichvar, Norman C. Melvin,
Mary L. Butterwick, and William N. Kirchner.
Please see this
description and
documentation of the dataset.
Note that indicator categories do not refer to
degrees of wetness. Some obligate wetland species
occur in wetlands which are only temporarily or seasonally flooded.
Indicator categories:
OBL | Obligate Wetland
| Occurs almost always under natural conditions in wetlands.
| FACW | Facultative Wetland
| Usually occurs in wetlands, but occasionally found in non wetlands.
| FAC | Facultative
| Equally likely to occur in wetlands and non wetlands.
| FACU | Facultative Upland
| Usually occurs in non wetlands, but occasionally found on wetlands.
| UPL | Obligate Upland
| Occurs almost always under natural conditions in non wetlands in the region.
(Note that if a species does not occur in wetlands in any region, it is not on the National List.)
|
In the 2012 version of the National Wetland Plant List,
California has two regions:
- the Arid West, including most of the state; and
- Western Mountains, Valleys and Coast, including the Sierras and the northwest part of the state (MLRAs 22A, 22B, 05, and 04B -- map coming).
When a plant has a different value in each California region,
both values are included. Otherwise, a single value is included.
CALIFORNIA INVASIVE PLANT COUNCIL PLANT STATUS and URL
[calipc]
Example: 2:Torilis_arvensis.php
Weed status code and URL from the California Invasive Plant Council, updated August, 2017.
In the example above, 2 is the status code.
The meaning of the codes is as follows:
OCCURRENCE DATABASE TOTAL COUNT
[occ_count]
Example: 1236
The total count of records in the Calflora Occurrence Database that are unambiguously assignable to this taxon (including synonyms and included sub-taxa).
ITIS TAXONOMIC SERIAL NUMBER (TSN)
[itis_tsn]
Example: 34123
The
ITIS Taxonomic Serial Number for this taxon.
ONE COMMON NAME
[common]
Example: moutain dandelion
A single common name for the plant.
ACTIVE
[active]
Example: f
Is this record active? When there is a name change,
and several nomenclature authorities agree on the new name,
then Calflora will create a new record for the new name,
and set active = 'f' on the old record.
INDEX DATE
[index_date]
The date this record was added to the table.
NSTATUS
[nstatus]
Any special status, such as rare (for natives)
or invasive (for natives or non-natives).
1 |
native, rare |
2 |
native, not rare |
3 |
native, invasive |
4 |
non-native |
5 |
non-native, invasive |
ULTRAMAFIC AFFINITY
[um_affinity]
Example: 2.6 (strong indicator)
The mean ultramafic affinity
for this taxon, as per
Safford and Miller 2020.
The numbers, on a scale from 1.0 to 6.0, are interpreted as follows:
|
≥ 5.5 |
strict endemic |
170 taxa with 95% of their occurrences on ultramafics |
< 5.5 | ≥ 4.5 |
broad endemic |
85 taxa with 85-94% of their occurrences on ultramafics |
< 4.5 | ≥ 3.5 |
transition from broad endemic to strong indicator |
75 taxa with 75-84% of their occurrences on ultramafics |
< 3.5 | ≥ 2.5 |
strong indicator |
121 taxa with 65-74% of their occurrences on ultramafics |
< 2.5 | ≥ 1.5 |
weak indicator |
149 taxa with 55-64% of their occurrences on ultramafics |
< 1.5 | ≥ 1.0 |
weak indicator / indifferent |
79 taxa with 50-54% of their occurrences on ultramafics |
See also
Serpentine Soils and Plant Adaptations U. S. Forest Service:
Some plant species are seldom if ever found on serpentines, others are indifferent meaning they can occur both on, or off, serpentines, yet others are almost entirely restricted to serpentines.
SERPENTINE SOILS AND WHY THEY LIMIT PLANT SURVIVAL AND GROWTH
Earl B. Alexander, in Fremontia v. 38:4/39:1 (October 2010):
Plants that thrive on serpentine soils have unusual capabilities to utilize calcium when the alkaline earth elements are dominated by magnesium, and to tolerate concentrations of cobalt and nickel that are toxic to most plants.
PREVIOUS TAXON
[akatax]
An alternate scientific name of the plant that was in use before
the current value of TAXON was accepted.
This field is populated only for plant names that
were changed in the Jepson Manual Second Edition (2012) or subsequently,
and only when the name change is unambiguous.
For example, the record for the currently accepted taxon
Frangula californica contains the previously accepted taxon
Rhamnus californica as the value of this field.
PREVIOUS RECORDNUM
[xcrn]
If the record has a value for PREVIOUS TAXON,
this is the record number (calrecnum)
that corresponds to that name.
START BLOOM and END BLOOM
[sbloom]
[ebloom]
Example: 5 (May)
An integer from 1 to 12 indicating the month when the plant
is likely to start blooming in California (start bloom), and
the last month when the plant might still be blooming
in California (end bloom).
Together these two numbers suggest the bloom period
of the plant.
Data for bloom period comes from
the CNPS Inventory,
USDA PLANTS,
various documents prepared by
NRCS California,
CalPhotos,
and the
Jepson eFlora.
For weeds, Joe DiTomaso's
Weeds of California
was also consulted.
Calflora observation records (where the contributor has indicated
that the plant was flowering) are also consulted periodically as
this data is maintained.
Of these sources, CalPhotos is the most interesting,
because when a blooming plant is well covered by multiple photographers
on CalPhotos, it is possible to induce the bloom period
by looking at the dates of many photos.
In this way, CalPhotos can often serve as a reality check for data
from other sources.
Caveats.
There are some caveats about the use of this
bloom period data. First, the bloom period as stated
tends to bracket the actual bloom period for
a plant at a particular location during a particular year.
The data is for the whole state, and some plants with a wide
geographic range exhibit significant differences in
bloom period location-by-location and year-by-year.
Second, the bloom period for some California native plants
is not yet well documented, so that what Calflora shows
may be taken as a first hypothesis. You can help us
to correct any errors. If you see a bloom period for a plant
on Calflora that is too short, here is what to do:
- Register as a
contributor
- Take a photo of the plant in bloom during the missing month
(for instance, if the bloom period is stated as March - May,
and you know it blooms in June, wait until June, and then
take a photo of it).
-
Enter an observation with
Plant Observation Entry
and add your photo (or a link to your photo) to the record.
Be sure to set the value of Phenology to Flowering.
You can also just write to us
to suggest a correction.
In the
Jepson Manual Second Edition, 45 plants (listed below) are shown as having both a spring and
a fall bloom period each year.
Calflora only shows the first bloom period for these plants.
Adenophyllum cooperi
|
Apr--Jun, Sep--Nov
|
Adenophyllum porophylloides
|
Mar--Jun, Oct--Dec
|
Ageratina herbacea
|
May--Jun, Oct--Nov
|
Bahiopsis parishii
|
Feb--Jun, Sep--Oct
|
Bahiopsis reticulata
|
Feb--Jun, Sep--Oct
|
Baileya multiradiata
|
Apr--Jul, Oct
|
Baileya pauciradiata
|
Dec--Jun, Oct
|
Baileya pleniradiata
|
Mar--Jun, Oct--Nov
|
Brickellia frutescens
|
Mar--Jun, Oct--Nov
|
Dieteria asteroides var. asteroides
|
Mar--Jun, Sep--Oct
|
Encelia farinosa
|
Jan--Jun, Aug--Sep
|
Encelia farinosa
|
Jan--Jun, Aug--Sep
|
Encelia virginensis
|
Mar--Jun, Dec
|
Ericameria pinifolia
|
Apr--Jul, Sep--Jan
|
Geraea canescens
|
Jan--May, Sep--Nov
|
Helianthus niveus subsp. tephrodes
|
Mar--May, Oct--Jan
|
Heterotheca villosa var. scabra
|
Apr--May, Oct--Nov
|
Hymenopappus filifolius var. eriopodus
|
May--Jun, Oct
|
Perityle emoryi
|
Jan--Jun, Oct--Nov
|
Psilostrophe cooperi
|
Mar--Jul, Oct--Jan
|
Senecio flaccidus var. monoensis
|
Apr--Jun, Sep--Nov
|
Thymophylla pentachaeta var. belenidium
|
(Mar)Apr--Jun, Sep--Oct
|
Trichoptilium incisum
|
Jan--May, Oct--Dec
|
Trixis californica var. californica
|
Jan--May, Jul--Aug
|
Xanthisma spinulosum var. gooddingii
|
Feb--May, Sep--Oct
|
Xylorhiza tortifolia var. tortifolia
|
Mar--Jun, Oct
|
Pholisma arenarium
|
Apr--Jul, Oct
|
Bernardia incana
|
Apr--May, Oct--Nov
|
Chamaesyce micromera
|
Apr--Jun, Sep--Dec
|
Calliandra eriophylla
|
Feb--Apr, after Sep--Oct rain
|
Petalonyx thurberi subsp. gilmanii
|
May--Jun, Sep--Nov
|
Horsfordia newberryi
|
Mar--Apr, Nov--Dec
|
Malacothamnus densiflorus
|
May--Jul, Sep--Oct
|
Malacothamnus orbiculatus
|
May--Jul, Oct--Nov
|
Oxalis bowiei
|
Apr--Jun, Oct--Dec
|
Ranunculus sceleratus var. sceleratus
|
Apr--Jun, Oct
|
Galium wrightii
|
May--Jun, Aug--Sep
|
Fagonia laevis
|
Mar--May, Nov--Jan
|
Fagonia pachyacantha
|
Mar--May, Nov--Jan
|
Tridens muticus var. muticus
|
Apr--May, Oct--Nov
|
TOXICITY
[toxic]
An indication of the known toxicity of a plant.
The values shown are from
and other sources.
Toxicity is presented in three broad classes.
The dangerous parts of the plant (leaf, stem, root, fruit, or seed) are indicated for each plant.
- Plants with parts that are poisonous to ingest. These are labelled Do not eat.
- Plants with parts that definitely cause a severe skin irritation when touched.
- Plants with parts that may cause skin irritation when touched.
Please see this
Advanced Search for Plants search to see all currrently listed toxic plants.
Note that most lists of toxic plants (including this one) are not complete.
Because the sensitivity to toxins varies widely between individuals,
any plant might cause an unexpected reaction in certain individuals.
|
|
Field List:
calrecnum
calname
taxon
genus
species
author1
rank
ssp_var
author2
family
parent_child
parent_rec
parent_name
treatment
category
lifeform
native
us_dist
plant_community
habitat_descriptors
countylist
rarity
ca_status
fed_status
cdfa_weed_status
fed_nox_weed
wetland
plants_code
calipc
itis_tsn
common
um_affinity
akatax
xcrn
sbloom
ebloom
active
index_date
nstatus
toxic
|